Curriculum Vitae

Medema group, Bioinformatics group, Wageningen University & Research

• Search for biosynthetic gene clusters in marine sponges and seaweed for downstream heterologous expression
• Marine microbiome metagenomics

Medema group & Detmer sipkema lab, Bioinformatics group & Molecular ecology group, Wageningen University & Research

• Performed large-scale metagenomic and metatranscriptomic analyses
• Executed functional annotation and targeted marine bacteria from marine sponges
• Searched for novel biosynthetic gene clusters with unconventional techniques within undercharacterized phyla (Acidobacteriota)
• Supervised 2 Msc and 1 BSc students for both: computational and molecular laboratory techniques
• Communicated work in 8 cross-disciplinary international conferences

Information System Development

• The position was focused on replicating and addressing bug cases within testing servers. Proficiency in SQL, familiarity with LIMS, and a basic understanding of networking were requirements. Additionally, the role entailed compliance with HIPAA regulations.

Ivan Franko National University of Lviv

• During my work in the Lab, I was mainly responsible for: Genomics data analysis, phylogenetics, BGC mining, Software development and Manuscript writing

Wageningen University & Research

• Assisted with providing practical advice for students during the assignments

Wageningen University & Research

• Developed course materials for computational part of the course
• Assisted with teaching and practicals for the part of the course
• Graded assignments and provided detailed feedback

Wageningen University & Research

• Assisted with providing practical advice for students during the assignments

Ivan Franko National University of Lviv

Thesis: Genome of S.cyanogenus S136: secondary metabolism potential

• Performed biosynthetic gene cluster mining in S.cyanogenus S136 genome
• Developed software to support the analysis

Ivan Franko National University of Lviv

Thesis: Genetical control of morphogenesis in S.cyanogenus S136

• Performed heterologous expression of selected gene clusters
• Analysed phylogeny of rodlins and chaplins in Streptomycetaceae